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4 months ago

Attention U-Net: Learning Where to Look for the Pancreas

Ozan Oktay; Jo Schlemper; Loic Le Folgoc; Matthew Lee; Mattias Heinrich; Kazunari Misawa; Kensaku Mori; Steven McDonagh; Nils Y Hammerla; Bernhard Kainz; Ben Glocker; Daniel Rueckert

Attention U-Net: Learning Where to Look for the Pancreas

Abstract

We propose a novel attention gate (AG) model for medical imaging that automatically learns to focus on target structures of varying shapes and sizes. Models trained with AGs implicitly learn to suppress irrelevant regions in an input image while highlighting salient features useful for a specific task. This enables us to eliminate the necessity of using explicit external tissue/organ localisation modules of cascaded convolutional neural networks (CNNs). AGs can be easily integrated into standard CNN architectures such as the U-Net model with minimal computational overhead while increasing the model sensitivity and prediction accuracy. The proposed Attention U-Net architecture is evaluated on two large CT abdominal datasets for multi-class image segmentation. Experimental results show that AGs consistently improve the prediction performance of U-Net across different datasets and training sizes while preserving computational efficiency. The code for the proposed architecture is publicly available.

Code Repositories

trichtu/ConvLSTM-RAU-net
pytorch
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ktaebum/AttentionedDeepPaint
pytorch
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Shrajan/AAAI-2022
pytorch
Mentioned in GitHub
aparecidovieira/Road_extraction
tf
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bo-10000/VoxResNet
pytorch
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yykzjh/pmfsnet
pytorch
Mentioned in GitHub
trichtu/Recurrent_Attention_U_net
pytorch
Mentioned in GitHub
lbareiro/Image_Segmentation-master
pytorch
Mentioned in GitHub
SonwYang/building-extraction
pytorch
Mentioned in GitHub
PlumedSerpent/tmp_perspective_map
pytorch
Mentioned in GitHub
LeeJunHyun/Image_Segmentation
pytorch
Mentioned in GitHub
vankhoa21991/medicalImgSEg
pytorch
Mentioned in GitHub
Ericzhang1/BAGAU-Net
pytorch
Mentioned in GitHub
rezazad68/BCDU-Net
tf
Mentioned in GitHub
Arnukk/CASPIAN
tf
Mentioned in GitHub
MoaazK/unet-transformer
pytorch
Mentioned in GitHub
TheInfamousWayne/UNet
pytorch
Mentioned in GitHub
Shrajan/IB_U_Nets
pytorch
Mentioned in GitHub
BboyHanat/U-Net
pytorch
Mentioned in GitHub
sfczekalski/attention_unet
pytorch
Mentioned in GitHub
nabsabraham/focal-tversky-unet
tf
Mentioned in GitHub
MoaazK/comp511-project
pytorch
Mentioned in GitHub
imagesegmentation2020/indoor
pytorch
Mentioned in GitHub
SINGROUP/ED-AFM
pytorch
Mentioned in GitHub

Benchmarks

BenchmarkMethodologyMetrics
pancreas-segmentation-on-ct-150Att U-Net
Precision: 0.849
Recall: 0.841
pancreas-segmentation-on-tcia-pancreas-ctAtt U-Net
Dice Score: 0.831

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