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3 months ago

An Information Extraction Study: Take In Mind the Tokenization!

Christos Theodoropoulos Marie-Francine Moens

An Information Extraction Study: Take In Mind the Tokenization!

Abstract

Current research on the advantages and trade-offs of using characters, instead of tokenized text, as input for deep learning models, has evolved substantially. New token-free models remove the traditional tokenization step; however, their efficiency remains unclear. Moreover, the effect of tokenization is relatively unexplored in sequence tagging tasks. To this end, we investigate the impact of tokenization when extracting information from documents and present a comparative study and analysis of subword-based and character-based models. Specifically, we study Information Extraction (IE) from biomedical texts. The main outcome is twofold: tokenization patterns can introduce inductive bias that results in state-of-the-art performance, and the character-based models produce promising results; thus, transitioning to token-free IE models is feasible.

Code Repositories

christos42/inductive_bias_IE
Official
pytorch
Mentioned in GitHub

Benchmarks

BenchmarkMethodologyMetrics
relation-extraction-on-ade-corpusPFN (ALBERT XXL, average aggregation)
NER Macro F1: 91.5
RE+ Macro F1: 83.9

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