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3 months ago

Medical Image Segmentation via Cascaded Attention Decoding

{Radu Marculescu Md Mostafijur Rahman}

Medical Image Segmentation via Cascaded Attention Decoding

Abstract

Transformers have shown great promise in medical image segmentation due to their ability to capture long-range dependencies through self-attention. However, they lack the ability to learn the local (contextual) relations among pixels. Previous works try to overcome this problem by embedding convolutional layers either in the encoder or decoder modules of transformers thus ending up sometimes with inconsistent features. To address this issue, we propose a novel attention-based decoder, namely CASCaded Attention DEcoder (CASCADE), which leverages the multiscale features of hierarchical vision transformers. CASCADE consists of i) an attention gate which fuses features with skip connections and ii) a convolutional attention module that enhances the long-range and local context by suppressing background information. We use a multi-stage feature and loss aggregation framework due to their faster convergence and better performance. Our experiments demonstrate that transformers with CASCADE significantly outperform state-of-the-art CNN- and transformer-based approaches, obtaining up to 5.07% and 6.16% improvements in DICE and mIoU scores, respectively. CASCADE opens new ways of designing better attention-based decoders.

Benchmarks

BenchmarkMethodologyMetrics
medical-image-segmentation-on-automaticTransCASCADE
Avg DSC: 91.63
medical-image-segmentation-on-automaticPVT-CASCADE
Avg DSC: 91.46
medical-image-segmentation-on-cvc-clinicdbPVT-CASCADE
mIoU: 0.8998
mean Dice: 0.9434
medical-image-segmentation-on-cvc-colondbPVT-CASCADE
mIoU: 0.7453
mean Dice: 0.8254
medical-image-segmentation-on-etisPVT-CASCADE
mIoU: 0.7258
mean Dice: 0.8007
medical-image-segmentation-on-kvasir-segPVT-CASCADE
mIoU: 0.8776
mean Dice: 0.9258
medical-image-segmentation-on-miccai-2015-1TransCASCADE
Avg DSC: 82.68
Avg HD: 17.34
medical-image-segmentation-on-miccai-2015-1PVT-CASCADE
Avg DSC: 81.06
Avg HD: 20.23
polyp-segmentation-on-kvasir-segPVT-CASCADE
mDice: 0.9258
mIoU: 0.8776

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